Limm-c.f
# Fit the model fit <- lmFit(expr, design)
Perform the statistical analysis to find differentially expressed genes with eBayes and topTable . limm-c.f
Because for “limm-c.f,” you must rely on where you found it: # Fit the model fit <- lmFit(expr, design)
limma can handle a wide range of experimental designs, including multiple factors, interactions, and batch effects. # Fit the model fit <
limma integrates well with other packages in the Bioconductor project, making it easy to use as part of a larger analysis pipeline.